Use pytest.mark.parametrize

Author: seisman

pygmt/tests/test_clib_to_ndarray.py

@@ -7,6 +7,7 @@
 import pandas as pd
 import pytest
 from pygmt.clib.conversion import _to_ndarray
+from pygmt.helpers.testing import skip_if_no
 
 try:
     import pyarrow as pa
@@ -15,99 +16,25 @@
 except ImportError:
     _HAS_PYARROW = False
 
-
-@pytest.fixture(scope="module", name="dtypes_numpy_numeric")
-def fixture_dtypes_numpy_numeric():
-    """
-    List of NumPy numeric dtypes.
-
-    Reference: https://numpy.org/doc/stable/reference/arrays.scalars.html
-    """
-    return [
-        np.int8,
-        np.int16,
-        np.int32,
-        np.int64,
-        np.longlong,
-        np.uint8,
-        np.uint16,
-        np.uint32,
-        np.uint64,
-        np.ulonglong,
-        np.float16,
-        np.float32,
-        np.float64,
-        np.longdouble,
-        np.complex64,
-        np.complex128,
-        np.clongdouble,
-    ]
-
-
-@pytest.fixture(scope="module", name="dtypes_pandas_numeric")
-def fixture_dtypes_pandas_numeric():
-    """
-    List of pandas numeric dtypes.
-
-    Reference: https://pandas.pydata.org/docs/reference/arrays.html
-    """
-    return [
-        pd.Int8Dtype(),
-        pd.Int16Dtype(),
-        pd.Int32Dtype(),
-        pd.Int64Dtype(),
-        pd.UInt8Dtype(),
-        pd.UInt16Dtype(),
-        pd.UInt32Dtype(),
-        pd.UInt64Dtype(),
-        pd.Float32Dtype(),
-        pd.Float64Dtype(),
-    ]
-
-
-@pytest.fixture(scope="module", name="dtypes_pandas_numeric_pyarrow_backend")
-def fixture_dtypes_pandas_numeric_pyarrow_backend():
-    """
-    List of pandas dtypes that use pyarrow as the backend.
-
-    Reference: https://pandas.pydata.org/docs/user_guide/pyarrow.html
-    """
-    return [
-        "int8[pyarrow]",
-        "int16[pyarrow]",
-        "int32[pyarrow]",
-        "int64[pyarrow]",
-        "uint8[pyarrow]",
-        "uint16[pyarrow]",
-        "uint32[pyarrow]",
-        "uint64[pyarrow]",
-        "float32[pyarrow]",
-        "float64[pyarrow]",
-    ]
-
-
-@pytest.fixture(scope="module", name="dtypes_pyarrow_numeric")
-def fixture_dtypes_pyarrow_numeric():
-    """
-    List of pyarrow numeric dtypes.
-
-    Reference: https://arrow.apache.org/docs/python/api/datatypes.html
-    """
-    if not _HAS_PYARROW:
-        return []
-    return [
-        pa.int8(),
-        pa.int16(),
-        pa.int32(),
-        pa.int64(),
-        pa.uint8(),
-        pa.uint16(),
-        pa.uint32(),
-        pa.uint64(),
-        # pa.float16(), # Need special handling.
-        pa.float32(),
-        pa.float64(),
-    ]
+dtypes_numpy = [
+    np.int8,
+    np.int16,
+    np.int32,
+    np.int64,
+    np.longlong,
+    np.uint8,
+    np.uint16,
+    np.uint32,
+    np.uint64,
+    np.ulonglong,
+    np.float16,
+    np.float32,
+    np.float64,
+    np.longdouble,
+    np.complex64,
+    np.complex128,
+    np.clongdouble,
+]
 
 
 def _check_result(result):
@@ -125,60 +52,97 @@ def _check_result(result):
     assert result.dtype != np.object_
 
 
-def test_to_ndarray_numpy_ndarray_numpy_numeric(dtypes_numpy_numeric):
+@pytest.mark.parametrize("dtype", dtypes_numpy)
+def test_to_ndarray_numpy_ndarray_numpy_numeric(dtype):
     """
     Test the _to_ndarray function with 1-D NumPy arrays.
     """
     # 1-D array
-    for dtype in dtypes_numpy_numeric:
-        array = np.array([1, 2, 3], dtype=dtype)
-        assert array.dtype == dtype
-        result = _to_ndarray(array)
-        _check_result(result)
-        npt.assert_array_equal(result, array)
+    array = np.array([1, 2, 3], dtype=dtype)
+    assert array.dtype == dtype
+    result = _to_ndarray(array)
+    _check_result(result)
+    npt.assert_array_equal(result, array)
 
     # 2-D array
-    for dtype in dtypes_numpy_numeric:
-        array = np.array([[1, 2, 3], [4, 5, 6]], dtype=dtype)
-        assert array.dtype == dtype
-        result = _to_ndarray(array)
-        _check_result(result)
-        npt.assert_array_equal(result, array)
+    array = np.array([[1, 2, 3], [4, 5, 6]], dtype=dtype)
+    assert array.dtype == dtype
+    result = _to_ndarray(array)
+    _check_result(result)
+    npt.assert_array_equal(result, array)
 
 
-def test_to_ndarray_pandas_series_numeric(
-    dtypes_numpy_numeric, dtypes_pandas_numeric, dtypes_pandas_numeric_pyarrow_backend
-):
+@pytest.mark.parametrize(
+    "dtype",
+    [
+        *dtypes_numpy,
+        pytest.param(pd.Int8Dtype(), id="Int8"),
+        pytest.param(pd.Int16Dtype(), id="Int16"),
+        pytest.param(pd.Int32Dtype(), id="Int32"),
+        pytest.param(pd.Int64Dtype(), id="Int64"),
+        pytest.param(pd.UInt8Dtype(), id="UInt8"),
+        pytest.param(pd.UInt16Dtype(), id="UInt16"),
+        pytest.param(pd.UInt32Dtype(), id="UInt32"),
+        pytest.param(pd.UInt64Dtype(), id="UInt64"),
+        pytest.param(pd.Float32Dtype(), id="Float32"),
+        pytest.param(pd.Float64Dtype(), id="Float64"),
+        pytest.param("int8[pyarrow]", marks=skip_if_no(package="pyarrow")),
+        pytest.param("int16[pyarrow]", marks=skip_if_no(package="pyarrow")),
+        pytest.param("int32[pyarrow]", marks=skip_if_no(package="pyarrow")),
+        pytest.param("int64[pyarrow]", marks=skip_if_no(package="pyarrow")),
+        pytest.param("uint8[pyarrow]", marks=skip_if_no(package="pyarrow")),
+        pytest.param("uint16[pyarrow]", marks=skip_if_no(package="pyarrow")),
+        pytest.param("uint32[pyarrow]", marks=skip_if_no(package="pyarrow")),
+        pytest.param("uint64[pyarrow]", marks=skip_if_no(package="pyarrow")),
+        pytest.param("float32[pyarrow]", marks=skip_if_no(package="pyarrow")),
+        pytest.param("float64[pyarrow]", marks=skip_if_no(package="pyarrow")),
+    ],
+)
+def test_to_ndarray_pandas_series_numeric(dtype):
     """
     Test the _to_ndarray function with pandas Series with NumPy dtypes, pandas dtypes,
     and pandas dtypes with pyarrow backend.
     """
-    for dtype in (
-        dtypes_numpy_numeric
-        + dtypes_pandas_numeric
-        + dtypes_pandas_numeric_pyarrow_backend
-    ):
-        series = pd.Series([1, 2, 3], dtype=dtype)
-        assert series.dtype == dtype
-        result = _to_ndarray(series)
-        _check_result(result)
-        npt.assert_array_equal(result, series)
+    series = pd.Series([1, 2, 3], dtype=dtype)
+    assert series.dtype == dtype
+    result = _to_ndarray(series)
+    _check_result(result)
+    npt.assert_array_equal(result, series)
 
 
 @pytest.mark.skipif(not _HAS_PYARROW, reason="pyarrow is not installed")
-def test_to_ndarray_pandas_series_pyarrow_dtype(dtypes_pyarrow_numeric):
+@pytest.mark.parametrize(
+    "dtype",
+    [
+        "int8",
+        "int16",
+        "int32",
+        "int64",
+        "uint8",
+        "uint16",
+        "uint32",
+        "uint64",
+        "float32",
+        "float64",
+    ],
+)
+def test_to_ndarray_pyarrow_array(dtype):
     """
     Test the _to_ndarray function with pandas Series with pyarrow dtypes.
     """
-    for dtype in dtypes_pyarrow_numeric:
-        array = pa.array([1, 2, 3], type=dtype)
-        assert array.type == dtype
-        result = _to_ndarray(array)
-        _check_result(result)
-        npt.assert_array_equal(result, array)
-
-    # Special handling for float16.
-    # Example from https://arrow.apache.org/docs/python/generated/pyarrow.float16.html
+    array = pa.array([1, 2, 3], type=dtype)
+    assert array.type == dtype
+    result = _to_ndarray(array)
+    _check_result(result)
+    npt.assert_array_equal(result, array)
+
+
+def test_to_ndarray_pyarrow_array_float16():
+    """
+    Test the _to_ndarray function with pyarrow float16 array.
+
+    Example from https://arrow.apache.org/docs/python/generated/pyarrow.float16.html
+    """
     array = pa.array(np.array([1.5, 2.5, 3.5], dtype=np.float16), type=pa.float16())
     result = _to_ndarray(array)
     _check_result(result)