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vtavanavtavana
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Merge branch 'master' into bump-version
2 parents b143fd2 + 95e2b7b commit 4f22b46

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‎.github/workflows/conda-package-cf.yml‎

Lines changed: 6 additions & 6 deletions
Original file line numberDiff line numberDiff line change
@@ -46,7 +46,7 @@ jobs:
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echo "pkgs_dirs: [~/.conda/pkgs]" >> ~/.condarc
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- name: Cache conda packages
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uses: actions/cache@5a3ec84eff668545956fd18022155c47e93e2684 # v4.2.3
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uses: actions/cache@0400d5f644dc74513175e3cd8d07132dd4860809 # v4.2.4
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env:
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CACHE_NUMBER: 0 # Increase to reset cache
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with:
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steps:
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- name: Download artifact
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uses: actions/download-artifact@d3f86a106a0bac45b974a628896c90dbdf5c8093 # v4.3.0
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uses: actions/download-artifact@634f93cb2916e3fdff6788551b99b062d0335ce0 # v5.0.0
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with:
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name: ${{ env.PACKAGE_NAME }} ${{ runner.os }} Python ${{ matrix.python_ver }}
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@@ -128,7 +128,7 @@ jobs:
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echo "pkgs_dirs: [~/.conda/pkgs]" >> ~/.condarc
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- name: Cache conda packages
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uses: actions/cache@5a3ec84eff668545956fd18022155c47e93e2684 # v4.2.3
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uses: actions/cache@0400d5f644dc74513175e3cd8d07132dd4860809 # v4.2.4
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env:
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CACHE_NUMBER: 0 # Increase to reset cache
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with:
@@ -190,7 +190,7 @@ jobs:
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run: conda install -n base conda-build
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- name: Cache conda packages
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uses: actions/cache@5a3ec84eff668545956fd18022155c47e93e2684 # v4.2.3
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uses: actions/cache@0400d5f644dc74513175e3cd8d07132dd4860809 # v4.2.4
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env:
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CACHE_NUMBER: 3 # Increase to reset cache
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with:
@@ -240,7 +240,7 @@ jobs:
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steps:
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- name: Download artifact
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uses: actions/download-artifact@d3f86a106a0bac45b974a628896c90dbdf5c8093 # v4.3.0
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uses: actions/download-artifact@634f93cb2916e3fdff6788551b99b062d0335ce0 # v5.0.0
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with:
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name: ${{ env.PACKAGE_NAME }} ${{ runner.os }} Python ${{ matrix.python_ver }}
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@@ -296,7 +296,7 @@ jobs:
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run: Get-Content -Path .\lockfile
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- name: Cache conda packages
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uses: actions/cache@5a3ec84eff668545956fd18022155c47e93e2684 # v4.2.3
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uses: actions/cache@0400d5f644dc74513175e3cd8d07132dd4860809 # v4.2.4
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env:
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CACHE_NUMBER: 0 # Increase to reset cache
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with:

‎.github/workflows/conda-package.yml‎

Lines changed: 17 additions & 8 deletions
Original file line numberDiff line numberDiff line change
@@ -36,7 +36,7 @@ jobs:
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echo "pkgs_dirs: [~/.conda/pkgs]" >> ~/.condarc
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- name: Cache conda packages
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uses: actions/cache@5a3ec84eff668545956fd18022155c47e93e2684 # v4.2.3
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uses: actions/cache@0400d5f644dc74513175e3cd8d07132dd4860809 # v4.2.4
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env:
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CACHE_NUMBER: 0 # Increase to reset cache
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with:
@@ -86,7 +86,7 @@ jobs:
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steps:
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- name: Download artifact
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uses: actions/download-artifact@d3f86a106a0bac45b974a628896c90dbdf5c8093 # v4.3.0
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uses: actions/download-artifact@634f93cb2916e3fdff6788551b99b062d0335ce0 # v5.0.0
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with:
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name: ${{ env.PACKAGE_NAME }} ${{ runner.os }} Python ${{ matrix.python }}
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@@ -126,7 +126,7 @@ jobs:
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echo "pkgs_dirs: [~/.conda/pkgs]" >> ~/.condarc
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- name: Cache conda packages
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uses: actions/cache@5a3ec84eff668545956fd18022155c47e93e2684 # v4.2.3
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uses: actions/cache@0400d5f644dc74513175e3cd8d07132dd4860809 # v4.2.4
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env:
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CACHE_NUMBER: 0 # Increase to reset cache
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with:
@@ -140,7 +140,13 @@ jobs:
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- name: Install mkl_fft
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run: |
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CHANNELS="-c $GITHUB_WORKSPACE/channel ${{ env.CHANNELS }}"
143-
conda create -n ${{ env.TEST_ENV_NAME }} $PACKAGE_NAME=${{ env.PACKAGE_VERSION }} python=${{ matrix.python }} pytest "scipy>=1.10" $CHANNELS
143+
conda create -n ${{ env.TEST_ENV_NAME }} $PACKAGE_NAME=${{ env.PACKAGE_VERSION }} python=${{ matrix.python }} pytest $CHANNELS
144+
if [[ "${{ matrix.python }}" != 3.9* ]]; then
145+
# Intel channel only has scipy=1.10 for Python 3.9, which needs mkl<2025
146+
# while scipy needs to install numpy and mkl_random and mkl_random-1.2.11 requires mkl>=2025
147+
# so avoid installing scipy for Python 3.9 which means third_party/scipy tests will not run
148+
conda install -n ${{ env.TEST_ENV_NAME }} "scipy>=1.10" $CHANNELS
149+
fi
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# Test installed packages
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conda list -n ${{ env.TEST_ENV_NAME }}
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@@ -180,7 +186,7 @@ jobs:
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conda install -n base conda-build
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- name: Cache conda packages
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uses: actions/cache@5a3ec84eff668545956fd18022155c47e93e2684 # v4.2.3
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uses: actions/cache@0400d5f644dc74513175e3cd8d07132dd4860809 # v4.2.4
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env:
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CACHE_NUMBER: 3 # Increase to reset cache
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with:
@@ -229,7 +235,7 @@ jobs:
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steps:
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- name: Download artifact
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uses: actions/download-artifact@d3f86a106a0bac45b974a628896c90dbdf5c8093 # v4.3.0
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uses: actions/download-artifact@634f93cb2916e3fdff6788551b99b062d0335ce0 # v5.0.0
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with:
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name: ${{ env.PACKAGE_NAME }} ${{ runner.os }} Python ${{ matrix.python }}
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@@ -285,7 +291,7 @@ jobs:
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run: Get-Content -Path .\lockfile
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- name: Cache conda packages
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uses: actions/cache@5a3ec84eff668545956fd18022155c47e93e2684 # v4.2.3
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uses: actions/cache@0400d5f644dc74513175e3cd8d07132dd4860809 # v4.2.4
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env:
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CACHE_NUMBER: 0 # Increase to reset cache
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with:
@@ -307,8 +313,11 @@ jobs:
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FOR /F "tokens=* USEBACKQ" %%F IN (`python -c "%SCRIPT%"`) DO (
308314
SET PACKAGE_VERSION=%%F
309315
)
310-
SET "TEST_DEPENDENCIES=pytest scipy"
316+
SET "TEST_DEPENDENCIES=pytest"
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conda install -n ${{ env.TEST_ENV_NAME }} ${{ env.PACKAGE_NAME }}=%PACKAGE_VERSION% %TEST_DEPENDENCIES% python=${{ matrix.python }} -c ${{ env.workdir }}/channel ${{ env.CHANNELS }}
318+
if ("${{ matrix.python }}" -ne "3.9") {
319+
conda install -n ${{ env.TEST_ENV_NAME }} scipy -c ${{ env.workdir }}/channel ${{ env.CHANNELS }}
320+
}
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- name: Report content of test environment
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shell: cmd /C CALL {0}

‎.github/workflows/openssf-scorecard.yml‎

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Original file line numberDiff line numberDiff line change
@@ -69,6 +69,6 @@ jobs:
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# Upload the results to GitHub's code scanning dashboard.
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- name: "Upload to code-scanning"
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uses: github/codeql-action/upload-sarif@51f77329afa6477de8c49fc9c7046c15b9a4e79d # v3.29.5
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uses: github/codeql-action/upload-sarif@76621b61decf072c1cee8dd1ce2d2a82d33c17ed # v3.29.8
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with:
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sarif_file: results.sarif

‎conda-recipe/bld.bat‎

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Original file line numberDiff line numberDiff line change
@@ -1,3 +1,13 @@
11
set MKLROOT=%PREFIX%
2-
%PYTHON% -m pip install --no-build-isolation --no-deps .
3-
if errorlevel 1 exit 1
2+
3+
rem Build wheel package
4+
if NOT "%WHEELS_OUTPUT_FOLDER%"=="" (
5+
%PYTHON% -m pip wheel --no-build-isolation --no-deps .
6+
if errorlevel 1 exit 1
7+
copy mkl_fft*.whl %WHEELS_OUTPUT_FOLDER%
8+
if errorlevel 1 exit 1
9+
) ELSE (
10+
rem Build conda package
11+
%PYTHON% -m pip install --no-build-isolation --no-deps .
12+
if errorlevel 1 exit 1
13+
)

‎conda-recipe/build.sh‎

Lines changed: 14 additions & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -2,4 +2,17 @@
22

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export MKLROOT=$PREFIX
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export CFLAGS="-I$PREFIX/include $CFLAGS"
5-
$PYTHON -m pip install --no-build-isolation --no-deps .
5+
export LDFLAGS="-Wl,-rpath,\$ORIGIN/../.. -Wl,-rpath,\$ORIGIN/../../.. -L${PREFIX}/lib ${LDFLAGS}"
6+
7+
read -r GLIBC_MAJOR GLIBC_MINOR <<<"$(conda list '^sysroot_linux-64$' \
8+
| tail -n 1 | awk '{print $2}' | grep -oP '\d+' | head -n 2 | tr '\n' ' ')"
9+
10+
# Build wheel package
11+
if [ -n "${WHEELS_OUTPUT_FOLDER}" ]; then
12+
$PYTHON -m pip wheel --no-build-isolation --no-deps .
13+
${PYTHON} -m wheel tags --remove --platform-tag "manylinux_${GLIBC_MAJOR}_${GLIBC_MINOR}_x86_64" mkl_fft*.whl
14+
cp mkl_fft*.whl "${WHEELS_OUTPUT_FOLDER}"
15+
else
16+
# Build conda package
17+
$PYTHON -m pip install --no-build-isolation --no-deps .
18+
fi

‎conda-recipe/conda_build_config.yaml‎

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Original file line numberDiff line numberDiff line change
@@ -0,0 +1,16 @@
1+
c_compiler: # [linux]
2+
- gcc # [linux]
3+
cxx_compiler: # [linux]
4+
- gxx # [linux]
5+
cxx_compiler_version: # [linux]
6+
- '14' # [linux]
7+
c_stdlib: # [linux]
8+
- sysroot # [linux]
9+
c_stdlib_version: # [linux]
10+
- '2.28' # [linux]
11+
c_stdlib: # [win]
12+
- vs # [win]
13+
cxx_compiler: # [win]
14+
- vs2017 # [win]
15+
c_compiler: # [win]
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- vs2017 # [win]

‎conda-recipe/meta.yaml‎

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Original file line numberDiff line numberDiff line change
@@ -10,23 +10,27 @@ source:
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build:
1212
number: {{ buildnumber }}
13+
script_env:
14+
- WHEELS_OUTPUT_FOLDER
1315
ignore_run_exports:
1416
- blas
1517

1618
requirements:
1719
build:
1820
- {{ compiler('c') }}
21+
- {{ stdlib('c') }}
1922
host:
2023
- python
24+
- pip
2125
- setuptools >=77
2226
- mkl-devel
23-
- mkl-devel 2024.2.* # [py==39]
2427
- cython
2528
- numpy-base
29+
- wheel >=0.41.3
2630
run:
2731
- python
2832
- mkl-service
29-
- {{ pin_compatible('numpy') }}
33+
- {{ pin_compatible('numpy-base') }}
3034

3135
test:
3236
commands:

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