update link to exampleData zip and R install script

modify docker file to tidy up a few directories

Author: markdunning

Dockerfile

@@ -10,4 +10,7 @@ WORKDIR /home/rstudio
 RUN wget https://www.dropbox.com/s/ve6o68hkbthe3lo/exampleData.zip
 RUN unzip exampleData.zip
 RUN R -f installBioCPkgs.R
-RUN rm -r images javascripts stylesheets params.json index.html exampleData.zip
+RUN rm -r images javascripts stylesheets params.json index.html exampleData.zip
+RUN mkdir Practicals/exampleData
+RUN mv exampleData/* Practicals/exampleData
+RUN rm -r exampleData/

index.html

@@ -49,7 +49,7 @@ <h3>
         <h3>
         <a id="software" class="anchor" href="#software" aria-hidden="true"><span class="octicon octicon-link"></span></a>How to Run the course.</h3>
         <p>
-        Download the materials from this repository and <a href="GeneticPracticalPackageInstall.R">install</a> the required R and Bioconductor packages
+        Download the materials from this repository and <a href="installBioCPkgs.R">install</a> the required R and Bioconductor packages
         </p>
 
       <h3>
@@ -67,7 +67,7 @@ <h3>
         <h3>
         <a id="data" class="anchor" href="#data" aria-hidden="true"><span class="octicon octicon-link"></span></a>Example Data.</h3>
         <p>
-        An exampleData folder is required to run the practicals sucessfully. This folder can be downloaded from <a href="https://app.box.com/s/ntjkjn3vb4jkvy6kq664">https://app.box.com/s/ntjkjn3vb4jkvy6kq664.</a> Once downloaded and unzipped, the folder should be placed inside the Practicals directory
+        An exampleData folder is required to run the practicals sucessfully. This folder can be downloaded from <a href="https://www.dropbox.com/s/ve6o68hkbthe3lo/exampleData.zip">Dropbox.</a> Once downloaded and unzipped, the folder should be placed inside the Practicals directory
 
         </p>