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README.md

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@@ -17,7 +17,7 @@ environments composed of GA4GH TES nodes.
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proTES gateway may serve as a crucial component in federated compute networks
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based on the GA4GH Cloud ecosystem. Its primary purpose is to provide
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centralized features to a federated network of independently operated GA4GH TES
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centralized features to a federated network of independently operated GA4GH TES
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instances. As such, it can serve, for example, as a compatibility layer, a load
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balancer workload distribution layer, a public entry point to an enclave of
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independent compute nodes, or a means of collecting telemetry.
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evenly (actually: randomly!) distributes workloads across a network of TES
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endpoints
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* **Bringing compute to the data**: The
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`pro_tes.middleware.task_distribution.distance` plugin selects TES endpoints
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`pro_tes.middleware.task_distribution.distance` plugin selects TES endpoints
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to relay incoming requests to in such a way that the distance the (input) data
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of a task has to travel across the network of TES endpoints is minimized.
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of a task has to travel across the network of TES endpoints is minimized.
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### Implementation notes
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### Prerequisites
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Create data directory and required subdiretories
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Create data directory and required subdirectories
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```bash
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export PROTES_DATA_DIR=/path/to/data/directory
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## Versioning
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The project adopts the [semantic versioning][semver] scheme for versioning.
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The project adopts the [semantic versioning][res-sem-ver] scheme for versioning.
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Currently the service is in beta stage, so the API may change and even break
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without further notice. However, once we deem the service stable and "feature
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complete", the major, minor and patch version will shadow the supported TES
@@ -174,22 +174,19 @@ thread in our [Q&A forum][contact-qa], or send us an [email][contact-email].
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[docs-contributing]: <https://elixir-cloud-aai.github.io/guides/guide-contributor/>
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[docs-deploy]: deployment/README.md
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[docs-license]: LICENSE
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[GA4GH TES OpenAPI specification]:<https://github.com/ga4gh/task-execution-schemas>
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[image-protes-overview]: <images/overview.svg>
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[res-celery]: <http://www.celeryproject.org/>
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[res-connexion]: <https://github.com/zalando/connexion>
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[res-docker]: <https://www.docker.com/>
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[res-docker-compose]: <https://docs.docker.com/compose/>
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[res-elixir-cloud-aai]: <https://elixir-cloud.dcc.sib.swiss/>
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[res-flask]: <http://flask.pocoo.org/>
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[res-foca]: <https://github.com/elixir-cloud-aai/foca>
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[res-ga4gh]: <https://www.ga4gh.org/>
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[res-ga4gh-cloud]: <https://www.ga4gh.org/work_stream/cloud/>
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[res-ga4gh-tes]: <https://github.com/ga4gh/task-execution-schemas>
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[res-git]: <https://git-scm.com/>
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[res-helm]: <https://helm.sh/>
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[res-kubernetes]: <https://kubernetes.io/>
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[res-mondodb]: <https://www.mongodb.com/>
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[res-ouath2]: <https://oauth.net/2/>
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[res-mongodb]: <https://www.mongodb.com/>
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[res-oauth2]: <https://oauth.net/2/>
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[res-rabbitmq]: <https://www.rabbitmq.com/>
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[res-sem-ver]: <https://semver.org/>

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