File tree Expand file tree Collapse file tree 1 file changed +3
-3
lines changed Expand file tree Collapse file tree 1 file changed +3
-3
lines changed Original file line number Diff line number Diff line change @@ -59,7 +59,7 @@ To run the Mindboggle jupyter notebook tutorial, first install the Mindboggle
5959Docker container (see below) and enter the bash shell of the container
6060from your $HOST (e.g., /Users/arno)::
6161
62- docker run --rm -ti -v $HOST:/home/jovyan/work -p 8888:8888 --entrypoint=/neurodocker/startup.sh nipy/mindboggle
62+ docker run --rm -ti -v $HOST:/home/jovyan/work -p 8888:8888 nipy/mindboggle
6363
6464Then run the notebook from within the container::
6565
@@ -133,7 +133,7 @@ on the cortical surfaces and in the cortical and non-cortical volumes
1331331. Enter the Docker container's bash shell to run ``recon-all ``,
134134``antsCorticalThickness.sh ``, and ``mindboggle `` commands::
135135
136- docker run --rm -ti -v $HOST:$DOCK --entrypoint=/neurodocker/startup.sh nipy/mindboggle
136+ docker run --rm -ti -v $HOST:$DOCK nipy/mindboggle
137137
1381382. Recommended: reset environment variables as above within the Docker container::
139139
@@ -219,7 +219,7 @@ Visualize output
219219------------------------------------------------------------------------------
220220To visualize Mindboggle output with roygbiv, start the Docker image with::
221221
222- docker run --rm -ti -v $HOST:$DOCK -p 5000:5000 --entrypoint /bin/bash nipy/mindboggle
222+ docker run --rm -ti -v $HOST:$DOCK -p 5000:5000 nipy/mindboggle
223223
224224and then inside the image, run roygbiv on an output directory::
225225
You can’t perform that action at this time.
0 commit comments