Add version support to MRTrix3Base

Author: ihnorton

nipype/interfaces/mrtrix3/base.py

@@ -5,10 +5,32 @@
                         absolute_import)
 
 from ... import logging
-from ..base import (CommandLineInputSpec, CommandLine, traits, File, isdefined)
+from ...utils.filemanip import which
+from ..base import (CommandLineInputSpec, CommandLine, traits, File, isdefined, PackageInfo)
 iflogger = logging.getLogger('nipype.interface')
 
 
+class Info(PackageInfo):
+    version_cmd = which('mrconvert')
+    if version_cmd:
+        version_cmd = version_cmd + ' --version'
+
+    @staticmethod
+    def parse_version(raw_info):
+        # info is like: "== mrconvert 0.3.15-githash"
+        for line in raw_info.splitlines():
+            if line.startswith('== mrconvert '):
+                v_string = line.split()[2]
+                break
+        else:
+            return None
+
+        # -githash may or may not be appended
+        v_string = v_string.split('-')[0]
+
+        return '.'.join(v_string.split('.')[:3])
+
+
 class MRTrix3BaseInputSpec(CommandLineInputSpec):
     nthreads = traits.Int(
         argstr='-nthreads %d',
@@ -78,3 +100,7 @@ def _parse_inputs(self, skip=None):
             pass
 
         return super(MRTrix3Base, self)._parse_inputs(skip=skip)
+
+    @property
+    def version(self):
+        return Info.version()

nipype/interfaces/mrtrix3/reconst.py

@@ -41,6 +41,7 @@ class FitTensorInputSpec(MRTrix3BaseInputSpec):
     reg_term = traits.Float(
         5.e3, usedefault=True,
         argstr='-regularisation %f',
+        max_ver='0.3.13',
         desc=('specify the strength of the regularisation term on the '
               'magnitude of the tensor elements (default = 5000). This '
               'only applies to the non-linear methods'))