Merge branch 'main' into sandeeep

Author: saisandeepramavath

.github/workflows/broken-linkcheck.yml

@@ -6,7 +6,7 @@ on:
 
 jobs:
   cleanup:
-    runs-on: ubuntu-latest
+    runs-on: ubuntu-24.04
     if: github.repository_owner == 'pandas-dev'
     permissions:
       actions: write

.github/workflows/cache-cleanup-daily.yml

@@ -6,7 +6,8 @@ on:
 
 jobs:
   cleanup:
-    runs-on: ubuntu-latest
+    runs-on: ubuntu-24.04
+    if: github.repository_owner == 'pandas-dev'
     steps:
       - name: Clean Cache
         run: |

.github/workflows/cache-cleanup.yml

@@ -175,7 +175,7 @@ jobs:
 
       - name: Setup Python
         id: setup_python
-        uses: actions/setup-python@v5
+        uses: actions/setup-python@v6
         with:
           python-version: '3.11'
           cache: 'pip'

.github/workflows/code-checks.yml

@@ -28,8 +28,8 @@ jobs:
 
     steps:
       - uses: actions/checkout@v5
-      - uses: github/codeql-action/init@v3
+      - uses: github/codeql-action/init@v4
         with:
           languages: ${{ matrix.language }}
-      - uses: github/codeql-action/autobuild@v3
-      - uses: github/codeql-action/analyze@v3
+      - uses: github/codeql-action/autobuild@v4
+      - uses: github/codeql-action/analyze@v4

.github/workflows/codeql.yml

@@ -9,15 +9,6 @@ permissions:
   pull-requests: write
 
 jobs:
-  issue_assign:
-    runs-on: ubuntu-24.04
-    if: (!github.event.issue.pull_request) && github.event.comment.body == 'take'
-    concurrency:
-      group: ${{ github.actor }}-issue-assign
-    steps:
-      - run: |
-          echo "Assigning issue ${{ github.event.issue.number }} to ${{ github.event.comment.user.login }}"
-          curl -H "Authorization: token ${{ secrets.GITHUB_TOKEN }}" -d '{"assignees": ["${{ github.event.comment.user.login }}"]}' https://api.github.com/repos/${{ github.repository }}/issues/${{ github.event.issue.number }}/assignees
   preview_docs:
     runs-on: ubuntu-24.04
     if: github.event.issue.pull_request && github.event.comment.body == '/preview'
@@ -28,64 +19,3 @@ jobs:
         with:
           previewer-server: "https://pandas.pydata.org/preview"
           artifact-job: "Doc Build and Upload"
-  asv_run:
-    runs-on: ubuntu-24.04
-    # TODO: Support more benchmarking options later, against different branches, against self, etc
-    if: github.event.issue.pull_request && startsWith(github.event.comment.body, '@github-actions benchmark')
-    defaults:
-      run:
-        shell: bash -el {0}
-    env:
-      ENV_FILE: environment.yml
-      COMMENT: ${{github.event.comment.body}}
-
-    concurrency:
-      # Set concurrency to prevent abuse(full runs are ~5.5 hours !!!)
-      # each user can only run one concurrent benchmark bot at a time
-      # We don't cancel in progress jobs, but if you want to benchmark multiple PRs, you're gonna have
-      # to wait
-      group: ${{ github.actor }}-asv
-      cancel-in-progress: false
-
-    steps:
-      - name: Checkout
-        uses: actions/checkout@v5
-        with:
-          fetch-depth: 0
-
-        # Although asv sets up its own env, deps are still needed
-        # during discovery process
-      - name: Set up Conda
-        uses: ./.github/actions/setup-conda
-
-      - name: Run benchmarks
-        id: bench
-        continue-on-error: true # asv will exit code 1 for regressions
-        run: |
-          # extracting the regex, see https://stackoverflow.com/a/36798723
-          REGEX=$(echo "$COMMENT" | sed -n "s/^.*-b\s*\(\S*\).*$/\1/p")
-          cd asv_bench
-          asv check -E existing
-          git remote add upstream https://github.com/pandas-dev/pandas.git
-          git fetch upstream
-          asv machine --yes
-          asv continuous -f 1.1 -b $REGEX upstream/main HEAD
-          echo 'BENCH_OUTPUT<<EOF' >> $GITHUB_ENV
-          asv compare -f 1.1 upstream/main HEAD >> $GITHUB_ENV
-          echo 'EOF' >> $GITHUB_ENV
-          echo "REGEX=$REGEX" >> $GITHUB_ENV
-
-      - uses: actions/github-script@v7
-        env:
-          BENCH_OUTPUT: ${{env.BENCH_OUTPUT}}
-          REGEX: ${{env.REGEX}}
-        with:
-          script: |
-            const ENV_VARS = process.env
-            const run_url = `https://github.com/${context.repo.owner}/${context.repo.repo}/actions/runs/${context.runId}`
-            github.rest.issues.createComment({
-              issue_number: context.issue.number,
-              owner: context.repo.owner,
-              repo: context.repo.repo,
-              body: '\nBenchmarks completed. View runner logs here.' + run_url + '\nRegex used: '+ 'regex ' + ENV_VARS["REGEX"] + '\n' + ENV_VARS["BENCH_OUTPUT"]
-            })

.github/workflows/comment-commands.yml

@@ -21,7 +21,7 @@ jobs:
     env:
       DEPRECATION_TRACKER_ISSUE: 56596
     steps:
-    - uses: actions/github-script@v7
+    - uses: actions/github-script@v8
       id: update-deprecation-issue
       with:
         script: |

.github/workflows/deprecation-tracking-bot.yml

@@ -40,7 +40,7 @@ jobs:
 
       - name: Setup Python
         id: setup_python
-        uses: actions/setup-python@v5
+        uses: actions/setup-python@v6
         with:
           python-version: '3.11'
 

.github/workflows/package-checks.yml

@@ -14,7 +14,7 @@ jobs:
     if: github.repository_owner == 'pandas-dev'
     runs-on: ubuntu-24.04
     steps:
-    - uses: actions/stale@v9
+    - uses: actions/stale@v10
       with:
         repo-token: ${{ secrets.GITHUB_TOKEN }}
         stale-pr-message: "This pull request is stale because it has been open for thirty days with no activity. Please [update](https://pandas.pydata.org/pandas-docs/stable/development/contributing.html#updating-your-pull-request) and respond to this comment if you're still interested in working on this."

.github/workflows/stale-pr.yml

@@ -182,7 +182,7 @@ jobs:
     strategy:
       matrix:
         # Note: Don't use macOS latest since macos 14 appears to be arm64 only
-        os: [macos-13, macos-14, windows-latest]
+        os: [macos-13, macos-14, windows-2025]
         env_file: [actions-311.yaml, actions-312.yaml, actions-313.yaml]
       fail-fast: false
     runs-on: ${{ matrix.os }}
@@ -243,7 +243,7 @@ jobs:
           . ~/virtualenvs/pandas-dev/bin/activate
           python -m pip install --no-cache-dir -U pip wheel setuptools meson[ninja]==1.2.1 meson-python==0.13.1
           python -m pip install numpy -Csetup-args="-Dallow-noblas=true"
-          python -m pip install --no-cache-dir versioneer[toml] cython==3.0.10 python-dateutil pytest>=7.3.2 pytest-xdist>=3.4.0 hypothesis>=6.84.0
+          python -m pip install --no-cache-dir versioneer[toml] cython==3.0.10 python-dateutil pytest>=8.3.4 pytest-xdist>=3.6.1 hypothesis>=6.116.0
           python -m pip install --no-cache-dir --no-build-isolation -e . -Csetup-args="--werror"
           python -m pip list --no-cache-dir
           PANDAS_CI=1 python -m pytest -m 'not slow and not network and not clipboard and not single_cpu' pandas --junitxml=test-data.xml
@@ -280,7 +280,7 @@ jobs:
           /opt/python/cp313-cp313/bin/python -m venv ~/virtualenvs/pandas-dev
           . ~/virtualenvs/pandas-dev/bin/activate
           python -m pip install --no-cache-dir -U pip wheel setuptools meson-python==0.13.1 meson[ninja]==1.2.1
-          python -m pip install --no-cache-dir versioneer[toml] cython numpy python-dateutil pytest>=7.3.2 pytest-xdist>=3.4.0 hypothesis>=6.84.0
+          python -m pip install --no-cache-dir versioneer[toml] cython numpy python-dateutil pytest>=8.3.4 pytest-xdist>=3.6.1 hypothesis>=6.116.0
           python -m pip install --no-cache-dir --no-build-isolation -e . -Csetup-args="--werror"
           python -m pip list --no-cache-dir
 
@@ -313,7 +313,7 @@ jobs:
     #    To freeze this file, uncomment out the ``if: false`` condition, and migrate the jobs
     #    to the corresponding posix/windows-macos/sdist etc. workflows.
     # Feel free to modify this comment as necessary.
-    if: false
+    # if: false
     defaults:
       run:
         shell: bash -eou pipefail {0}
@@ -322,7 +322,7 @@ jobs:
       fail-fast: false
       matrix:
         # Separate out macOS 13 and 14, since macOS 14 is arm64 only
-        os: [ubuntu-24.04, macOS-13, macOS-14, windows-latest]
+        os: [ubuntu-24.04, macOS-13, macOS-14, windows-2025]
 
     timeout-minutes: 90
 
@@ -343,16 +343,16 @@ jobs:
           fetch-depth: 0
 
       - name: Set up Python Dev Version
-        uses: actions/setup-python@v5
+        uses: actions/setup-python@v6
         with:
-          python-version: '3.13-dev'
+          python-version: '3.14-dev'
 
       - name: Build Environment
         run: |
           python --version
           python -m pip install --upgrade pip setuptools wheel meson[ninja]==1.2.1 meson-python==0.13.1
           python -m pip install --pre --extra-index-url https://pypi.anaconda.org/scientific-python-nightly-wheels/simple numpy
-          python -m pip install versioneer[toml] python-dateutil tzdata cython hypothesis>=6.84.0 pytest>=7.3.2 pytest-xdist>=3.4.0 pytest-cov
+          python -m pip install versioneer[toml] python-dateutil tzdata cython hypothesis>=6.116.0 pytest>=8.3.4 pytest-xdist>=3.6.1 pytest-cov
           python -m pip install -ve . --no-build-isolation --no-index --no-deps -Csetup-args="--werror"
           python -m pip list
 
@@ -381,7 +381,7 @@ jobs:
 
       - name: Set up Python for pyodide-build
         id: setup-python
-        uses: actions/setup-python@v5
+        uses: actions/setup-python@v6
         with:
           python-version: '3.12'
 
@@ -399,7 +399,7 @@ jobs:
           pyodide build
 
       - name: Set up Node.js
-        uses: actions/setup-node@v4
+        uses: actions/setup-node@v6
         with:
           node-version: '20'