Updated workflow to automatically detect python version(s) #2052
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| name: Tests | ||
| on: | ||
| push: | ||
| branches: main | ||
| pull_request: | ||
| branches: main | ||
| jobs: | ||
| generate_python_matrix: | ||
| runs-on: ubuntu-latest | ||
| outputs: | ||
| python_versions: ${{ steps.set-matrix.outputs.python_versions }} | ||
| min_python_version: ${{ steps.set-matrix.outputs.min_python_version }} | ||
| steps: | ||
| - name: Checkout STUMPY | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| repository: stumpy-dev/stumpy | ||
| - name: Upgrade Pip, Install Minimum Requirements | ||
| run: | | ||
| python -m pip install --upgrade pip pandas lxml packaging | ||
| shell: bash | ||
| - name: Generate Python versions | ||
| id: set-matrix | ||
| run: | | ||
| MIN_PYTHON=$(python ./versions.py -mode min | grep python | awk '{print $2}') | ||
| MAX_PYTHON=$(python ./versions.py -mode max | grep python | awk '{print $2}') | ||
| echo "python_versions=$(python ./versions.py -mode range $MIN_PYTHON $MAX_PYTHON)" >> $GITHUB_OUTPUT | ||
| echo "min_python_version=$($MIN_PYTHON)" >> $GITHUB_OUTPUT | ||
| shell: bash | ||
| minimum-version-testing: | ||
| needs: generate_python_matrix: | ||
| runs-on: ${{ matrix.os }} | ||
| strategy: | ||
| matrix: | ||
| os: [ubuntu-latest, macos-latest, windows-latest] | ||
| python-version: ${{ fromJSON(needs.generate_python_matrix.outputs.min_python_version) }} | ||
| steps: | ||
| - uses: actions/checkout@v4 | ||
| - name: Set Up Python | ||
| uses: actions/setup-python@v5 | ||
| with: | ||
| python-version: ${{ matrix.python-version }} | ||
| - name: Display Python Version | ||
| run: python -c "import sys; print(sys.version)" | ||
| shell: bash | ||
| - name: Upgrade Pip | ||
| run: python -m pip install --upgrade pip | ||
| shell: bash | ||
| - name: Generate Minimum Requirements File | ||
| run: sed 's/>/=/g' requirements.txt | sed 's/$/\.*/g' > requirements.min.txt | ||
| shell: bash | ||
| - name: Install Minimum Requirements | ||
| run: python -m pip install --upgrade -r requirements.min.txt | ||
| shell: bash | ||
| - name: Install STUMPY And Other Dependencies | ||
| run: python -m pip install --editable .[ci] | ||
| shell: bash | ||
| - name: Run Black | ||
| run: black --check --diff ./ | ||
| shell: bash | ||
| - name: Run Flake8 | ||
| run: flake8 ./ | ||
| shell: bash | ||
| - name: Install and Link OpenMP | ||
| run: | | ||
| if [ "$RUNNER_OS" == "macOS" ]; then | ||
| echo "Installing OpenMP" | ||
| brew install libomp | ||
| echo "Linking OpenMP" | ||
| brew link --force libomp | ||
| echo "Find OpenMP Linking Location" | ||
| libfile=`brew list libomp --verbose | grep libomp.dylib` | ||
| echo $libfile | ||
| echo "Changing @rpath for the omppool.cpython-x-darwin.so shared object to look in $libfile" | ||
| ls "$(python -c 'import site; print(site.getsitepackages()[0])')"/numba/np/ufunc/omppool.*.so | xargs install_name_tool -change @rpath/libomp.dylib $libfile | ||
| fi | ||
| shell: bash | ||
| - name: Show Full Numba Environment | ||
| run: python -m numba -s | ||
| shell: bash | ||
| - name: Run Unit Tests | ||
| run: ./test.sh unit | ||
| shell: bash | ||
| unit-testing: | ||
| needs: generate_python_matrix | ||
| runs-on: ${{ matrix.os }} | ||
| strategy: | ||
| matrix: | ||
| os: [ubuntu-latest, macos-latest, windows-latest] | ||
| python-version: ${{ fromJSON(needs.generate_python_matrix.outputs.python_versions) }} | ||
| steps: | ||
| - uses: actions/checkout@v4 | ||
| - name: Set Up Python | ||
| uses: actions/setup-python@v5 | ||
| with: | ||
| python-version: ${{ matrix.python-version }} | ||
| - name: Display Python Version | ||
| run: python -c "import sys; print(sys.version)" | ||
| shell: bash | ||
| - name: Upgrade Pip | ||
| run: python -m pip install --upgrade pip | ||
| shell: bash | ||
| - name: Install STUMPY And Other Dependencies | ||
| run: python -m pip install --editable .[ci] | ||
| shell: bash | ||
| - name: Run Black | ||
| run: black --check --diff ./ | ||
| shell: bash | ||
| - name: Run Flake8 | ||
| run: flake8 ./ | ||
| shell: bash | ||
| - name: Install OpenMP | ||
| run: | | ||
| if [ "$RUNNER_OS" == "macOS" ]; then | ||
| echo "Installing OpenMP" | ||
| brew install libomp | ||
| echo "Linking OpenMP" | ||
| brew link --force libomp | ||
| echo "Find OpenMP Linking Location" | ||
| libfile=`brew list libomp --verbose | grep libomp.dylib` | ||
| echo $libfile | ||
| echo "Changing @rpath for the omppool.cpython-x-darwin.so shared object to look in $libfile" | ||
| ls "$(python -c 'import site; print(site.getsitepackages()[0])')"/numba/np/ufunc/omppool.*.so | xargs install_name_tool -change @rpath/libomp.dylib $libfile | ||
| fi | ||
| shell: bash | ||
| - name: Show Full Numba Environment | ||
| run: python -m numba -s | ||
| shell: bash | ||
| - name: Run Unit Tests | ||
| run: ./test.sh unit | ||
| shell: bash | ||
| coverage-testing: | ||
| needs: generate_python_matrix | ||
| runs-on: ${{ matrix.os }} | ||
| strategy: | ||
| matrix: | ||
| os: [ubuntu-latest, macos-latest, windows-latest] | ||
| python-version: ${{ fromJSON(needs.generate_python_matrix.outputs.python_versions) }} | ||
| steps: | ||
| - uses: actions/checkout@v4 | ||
| - name: Set Up Python | ||
| uses: actions/setup-python@v5 | ||
| with: | ||
| python-version: ${{ matrix.python-version }} | ||
| - name: Display Python Version | ||
| run: python -c "import sys; print(sys.version)" | ||
| shell: bash | ||
| - name: Upgrade Pip | ||
| run: python -m pip install --upgrade pip | ||
| shell: bash | ||
| - name: Install STUMPY And Other Dependencies | ||
| run: python -m pip install --editable .[ci] | ||
| shell: bash | ||
| - name: Run Black | ||
| run: black --check --diff ./ | ||
| shell: bash | ||
| - name: Run Flake8 | ||
| run: flake8 ./ | ||
| shell: bash | ||
| - name: Link OpenMP | ||
| run: | | ||
| if [ "$RUNNER_OS" == "macOS" ]; then | ||
| echo "Installing OpenMP" | ||
| brew install libomp | ||
| echo "Linking OpenMP" | ||
| brew link --force libomp | ||
| echo "Find OpenMP Linking Location" | ||
| libfile=`brew list libomp --verbose | grep libomp.dylib` | ||
| echo $libfile | ||
| echo "Changing @rpath for the omppool.cpython-x-darwin.so shared object to look in $libfile" | ||
| ls "$(python -c 'import site; print(site.getsitepackages()[0])')"/numba/np/ufunc/omppool.*.so | xargs install_name_tool -change @rpath/libomp.dylib $libfile | ||
| fi | ||
| shell: bash | ||
| - name: Show Full Numba Environment | ||
| run: python -m numba -s | ||
| shell: bash | ||
| - name: Run Coverage Tests | ||
| run: ./test.sh coverage | ||
| shell: bash | ||
